Adaptive evolution of gene expression in Drosophila. Cell Reports 20, 6, 1385-1395. manuscript, SI.
Host-pathogen coevolution and the emergence of broadly neutralizing antibodies in chronic infections. PLoS Genetics 12, 7, e1006171. manuscript, SI.
Evolution of molecular phenotypes under stabilizing selection. Journal of Statistical Mechanics: Theory and Experiment 2013, P01012. manuscript.
Universality and predictability in molecular quantitative genetics. Current Opinion in Genetics & Development 23, 6, 684-693. manuscript.
Formation of regulatory modules by local sequence duplication. PLoS Computational Biology 7, 10, e1002167. manuscript.
Analytical and numerical studies of sequence dependence of passage times for translocation of heterobiopolymers through nanopores. The Journal of Chemical Physics 129, 23. manuscript.(2008)